TOOLS & RESOURCES

We develop computational methods to reconstruct genomes, identify structural variations, and understand their contribution to phenotypic differences.

SyRI

Identifies all structural and small-scale sequence differences between chromosome-scale assemblies.

GitHub Paper

plotsr

Visualizes structural similarities and rearrangements between multiple genomes.

GitHub Paper

coelsch

A suite of tools for identifying meiotic recombination events from single-nucleus sequencing data

GitHub Paper

findGSE

Estimates genome size by fitting k-mer frequency distributions.

GitHub Paper

SHOREmap

Enables simple and straightforward mapping-by-sequencing analysis.

GitHub Paper

Explore All Our Tools

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schneebergerlab on GitHub